Parallel Seed-Based Approach to Multiple Protein Structure Similarities Detection

Finding similarities between protein structures is a crucial task in molecular biology. Most of the existing tools require proteins to be aligned in order-preserving way and only find single alignments even when multiple similar regions exist. We propose a new seed-based approach that discovers mult...

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Bibliographic Details
Main Authors: Guillaume Chapuis, Mathilde Le Boudic-Jamin, Rumen Andonov, Hristo Djidjev, Dominique Lavenier
Format: Article
Language:English
Published: Hindawi Limited 2015-01-01
Series:Scientific Programming
Online Access:http://dx.doi.org/10.1155/2015/279715