McClintock: An Integrated Pipeline for Detecting Transposable Element Insertions in Whole-Genome Shotgun Sequencing Data

McClintock: An Integrated Pipeline for Detecting Transposable Element Insertions in Whole-Genome Shotgun Sequencing Data

Transposable element (TE) insertions are among the most challenging types of variants to detect in genomic data because of their repetitive nature and complex mechanisms of replication . Nevertheless, the recent availability of large resequencing data sets has spurred the development of many new met...

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Bibliographic Details
Main Authors: Michael G. Nelson, Raquel S. Linheiro, Casey M. Bergman
Format: Article
Language:English
Published: Oxford University Press 2017-08-01
Series:G3: Genes, Genomes, Genetics
Subjects:
transposable elements
bioinformatics
genomics
yeast
Online Access:http://g3journal.org/lookup/doi/10.1534/g3.117.043893

Internet

http://g3journal.org/lookup/doi/10.1534/g3.117.043893

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