An Algorithm for Identifying Novel Targets of Transcription Factor Families: Application to Hypoxia-inducible Factor 1 Targets

An Algorithm for Identifying Novel Targets of Transcription Factor Families: Application to Hypoxia-inducible Factor 1 Targets

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Efficient and effective analysis of the growing genomic databases requires the development of adequate computational tools. We introduce a fast method based on the suffix tree data structure for predicting novel targets of hypoxia-inducible factor 1 (HIF-1) from huge genome databases. The suffix tre...

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Bibliographic Details
Main Authors: Yue Jiang, Bojan Cukic, Donald A. Adjeroh, Heath D. Skinner, Jie Lin, Qingxi J. Shen, Bing-Hua Jiang
Format: Article
Language:English
Published: SAGE Publishing 2009-01-01
Series:Cancer Informatics
Subjects:
Algorithm
transcription factor
HIF-1
target identification
Online Access:http://www.la-press.com/an-algorithm-for-identifying-novel-targets-of-transcription-factor-fam-a1340

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http://www.la-press.com/an-algorithm-for-identifying-novel-targets-of-transcription-factor-fam-a1340

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