Single-cell lineage tracing by integrating CRISPR-Cas9 mutations with transcriptomic data

Lineage tracing studies combining CRISPR-Cas9 editing and scRNA-seq face several challenges and cannot integrate lineages from multiple individuals. Here the authors show that integration of mutation and expression leads to accurate lineage tree inference and enables the learning of a species-invari...

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Bibliographic Details
Main Authors: Hamim Zafar, Chieh Lin, Ziv Bar-Joseph
Format: Article
Language:English
Published: Nature Publishing Group 2020-06-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-020-16821-5