Identification and in vitro Characterization of a Novel Phage Endolysin that Targets Gram-Negative Bacteria

Most double-stranded (ds) DNA phages utilize holin proteins to secrete endolysin for host peptidoglycan lysis. In contrast, several holin-independent endolysins with secretion sequences or signal-arrest-release (SAR) sequences are secreted via the Sec pathway. In this study, we characterized a novel...

Full description

Bibliographic Details
Main Authors: Jaewoo Bai, Sangmi Lee, Sangryeol Ryu
Format: Article
Language:English
Published: MDPI AG 2020-03-01
Series:Microorganisms
Subjects:
Online Access:https://www.mdpi.com/2076-2607/8/3/447
id doaj-d76f52e72d714cb69fd918285ffcc1d3
record_format Article
spelling doaj-d76f52e72d714cb69fd918285ffcc1d32020-11-25T02:04:11ZengMDPI AGMicroorganisms2076-26072020-03-018344710.3390/microorganisms8030447microorganisms8030447Identification and in vitro Characterization of a Novel Phage Endolysin that Targets Gram-Negative BacteriaJaewoo Bai0Sangmi Lee1Sangryeol Ryu2Department of Food and Animal Biotechnology, Seoul National University, Seoul 08826, KoreaDepartment of Food and Nutrition, Chungbuk National University, Cheongju, Chungbuk 28644, KoreaDepartment of Food and Animal Biotechnology, Seoul National University, Seoul 08826, KoreaMost double-stranded (ds) DNA phages utilize holin proteins to secrete endolysin for host peptidoglycan lysis. In contrast, several holin-independent endolysins with secretion sequences or signal-arrest-release (SAR) sequences are secreted via the Sec pathway. In this study, we characterized a novel lysis protein (M4Lys) encoded by the dsDNA phage BSPM4, whose lysis function is not dependent on either holin or the Sec pathway in vitro. In silico analysis of M4Lys revealed that it contains a putative virion protein domain and an unusual C-terminal transmembrane domain (TMD). Turbidity reduction assays and liquid chromatography-mass spectrometry using purified peptidoglycan showed that the virion protein domain of M4Lys has peptidoglycan lysis activity. In vitro overproduction of M4Lys in <i>Escherichia coli</i> revealed that M4Lys alone caused rapid cell lysis. Treatment of <i>E. coli</i> with a Sec inhibitor did not inhibit the lysis activity of M4Lys, indicating that the Sec pathway is not involved in M4Lys-mediated cell lysis. Truncation of the TMD eliminated the cell lysis phenomenon, while production of the TMD alone did not induce the cell lysis. All these findings demonstrate that M4Lys is a novel endolysin that has a unique mosaic structure distinct from other canonical endolysins and the TMD plays a critical role in M4Lys-mediated in vitro cell lysis.https://www.mdpi.com/2076-2607/8/3/447cell lysis kineticsendolysinflagella-targeting phagetransmembrane domainsecretion
collection DOAJ
language English
format Article
sources DOAJ
author Jaewoo Bai
Sangmi Lee
Sangryeol Ryu
spellingShingle Jaewoo Bai
Sangmi Lee
Sangryeol Ryu
Identification and in vitro Characterization of a Novel Phage Endolysin that Targets Gram-Negative Bacteria
Microorganisms
cell lysis kinetics
endolysin
flagella-targeting phage
transmembrane domain
secretion
author_facet Jaewoo Bai
Sangmi Lee
Sangryeol Ryu
author_sort Jaewoo Bai
title Identification and in vitro Characterization of a Novel Phage Endolysin that Targets Gram-Negative Bacteria
title_short Identification and in vitro Characterization of a Novel Phage Endolysin that Targets Gram-Negative Bacteria
title_full Identification and in vitro Characterization of a Novel Phage Endolysin that Targets Gram-Negative Bacteria
title_fullStr Identification and in vitro Characterization of a Novel Phage Endolysin that Targets Gram-Negative Bacteria
title_full_unstemmed Identification and in vitro Characterization of a Novel Phage Endolysin that Targets Gram-Negative Bacteria
title_sort identification and in vitro characterization of a novel phage endolysin that targets gram-negative bacteria
publisher MDPI AG
series Microorganisms
issn 2076-2607
publishDate 2020-03-01
description Most double-stranded (ds) DNA phages utilize holin proteins to secrete endolysin for host peptidoglycan lysis. In contrast, several holin-independent endolysins with secretion sequences or signal-arrest-release (SAR) sequences are secreted via the Sec pathway. In this study, we characterized a novel lysis protein (M4Lys) encoded by the dsDNA phage BSPM4, whose lysis function is not dependent on either holin or the Sec pathway in vitro. In silico analysis of M4Lys revealed that it contains a putative virion protein domain and an unusual C-terminal transmembrane domain (TMD). Turbidity reduction assays and liquid chromatography-mass spectrometry using purified peptidoglycan showed that the virion protein domain of M4Lys has peptidoglycan lysis activity. In vitro overproduction of M4Lys in <i>Escherichia coli</i> revealed that M4Lys alone caused rapid cell lysis. Treatment of <i>E. coli</i> with a Sec inhibitor did not inhibit the lysis activity of M4Lys, indicating that the Sec pathway is not involved in M4Lys-mediated cell lysis. Truncation of the TMD eliminated the cell lysis phenomenon, while production of the TMD alone did not induce the cell lysis. All these findings demonstrate that M4Lys is a novel endolysin that has a unique mosaic structure distinct from other canonical endolysins and the TMD plays a critical role in M4Lys-mediated in vitro cell lysis.
topic cell lysis kinetics
endolysin
flagella-targeting phage
transmembrane domain
secretion
url https://www.mdpi.com/2076-2607/8/3/447
work_keys_str_mv AT jaewoobai identificationandinvitrocharacterizationofanovelphageendolysinthattargetsgramnegativebacteria
AT sangmilee identificationandinvitrocharacterizationofanovelphageendolysinthattargetsgramnegativebacteria
AT sangryeolryu identificationandinvitrocharacterizationofanovelphageendolysinthattargetsgramnegativebacteria
_version_ 1724944069204901888