MOCAT: a metagenomics assembly and gene prediction toolkit.

MOCAT: a metagenomics assembly and gene prediction toolkit.

MOCAT is a highly configurable, modular pipeline for fast, standardized processing of single or paired-end sequencing data generated by the Illumina platform. The pipeline uses state-of-the-art programs to quality control, map, and assemble reads from metagenomic samples sequenced at a depth of seve...

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Bibliographic Details
Main Authors: Jens Roat Kultima, Shinichi Sunagawa, Junhua Li, Weineng Chen, Hua Chen, Daniel R Mende, Manimozhiyan Arumugam, Qi Pan, Binghang Liu, Junjie Qin, Jun Wang, Peer Bork
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2012-01-01
Series:PLoS ONE
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/23082188/?tool=EBI

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https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/23082188/?tool=EBI

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