In silico design of hydrazone antioxidants and analysis of their free radical-scavenging mechanism by thermodynamic studies

Abstract Background Antioxidants are very crucial in maintaining the normal function of body cells, as they scavenge excess free radical in the body. A set of hydrazone antioxidants was designed by in silico screening. The density functional theory (DFT) method was employed to explore the reaction e...

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Main Authors: Ikechukwu Ogadimma Alisi, Adamu Uzairu, Stephen Eyije Abechi
Format: Article
Language:English
Published: SpringerOpen 2019-10-01
Series:Beni-Suef University Journal of Basic and Applied Sciences
Subjects:
Online Access:http://link.springer.com/article/10.1186/s43088-019-0011-2
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spelling doaj-d48f00af75814b39ac6046dfb04c83352020-11-25T04:04:10ZengSpringerOpenBeni-Suef University Journal of Basic and Applied Sciences2314-85432019-10-018111110.1186/s43088-019-0011-2In silico design of hydrazone antioxidants and analysis of their free radical-scavenging mechanism by thermodynamic studiesIkechukwu Ogadimma Alisi0Adamu Uzairu1Stephen Eyije Abechi2Department of Applied Chemistry, Federal University DutsinmaDepartment of Chemistry, Ahmadu Bello UniversityDepartment of Chemistry, Ahmadu Bello UniversityAbstract Background Antioxidants are very crucial in maintaining the normal function of body cells, as they scavenge excess free radical in the body. A set of hydrazone antioxidants was designed by in silico screening. The density functional theory (DFT) method was employed to explore the reaction energetics of their free radical-scavenging mechanism. With the aid of the developed quantitative structure-activity relationship (QSAR) model for hydrazone antioxidants, the structure and antioxidant activity of these compounds were predicted. Three potential reaction mechanisms were investigated, namely, hydrogen atom transfer (HAT), single-electron transfer followed by proton transfer (SET-PT) and sequential proton loss electron transfer (SPLET). Bond dissociation enthalpy (BDE), adiabatic ionization potential (AIP), proton dissociation enthalpy (PDE), proton affinity (PA), electron transfer enthalpy (ETE) and Gibbs free energy that characterize the various steps in these mechanisms were calculated in the gas phase. Results A total of 25 hydrazone antioxidants were designed, in which the molecule MHD 017 gave the best antioxidant activity. Among the tested molecules, MHD 017 at the 10-OH site gave the best results for the various thermodynamic parameters calculated. The reaction Gibbs free energy results also indicate that this is the most favoured site for free radical scavenge. Conclusion The obtained results show that HAT and SPLET mechanisms are the thermodynamically plausible reaction pathways of free radical scavenge by hydrazone antioxidants. The reactivity of these compounds towards the hydroperoxyl radical (HOO·) was greater than that towards the methyl peroxyl radical (CH3OO·) based on the exergonicity of the calculated reaction Gibbs free energy. Graphical abstracthttp://link.springer.com/article/10.1186/s43088-019-0011-2HydrazoneFree radicalAntioxidantScavenging mechanismIn silico design
collection DOAJ
language English
format Article
sources DOAJ
author Ikechukwu Ogadimma Alisi
Adamu Uzairu
Stephen Eyije Abechi
spellingShingle Ikechukwu Ogadimma Alisi
Adamu Uzairu
Stephen Eyije Abechi
In silico design of hydrazone antioxidants and analysis of their free radical-scavenging mechanism by thermodynamic studies
Beni-Suef University Journal of Basic and Applied Sciences
Hydrazone
Free radical
Antioxidant
Scavenging mechanism
In silico design
author_facet Ikechukwu Ogadimma Alisi
Adamu Uzairu
Stephen Eyije Abechi
author_sort Ikechukwu Ogadimma Alisi
title In silico design of hydrazone antioxidants and analysis of their free radical-scavenging mechanism by thermodynamic studies
title_short In silico design of hydrazone antioxidants and analysis of their free radical-scavenging mechanism by thermodynamic studies
title_full In silico design of hydrazone antioxidants and analysis of their free radical-scavenging mechanism by thermodynamic studies
title_fullStr In silico design of hydrazone antioxidants and analysis of their free radical-scavenging mechanism by thermodynamic studies
title_full_unstemmed In silico design of hydrazone antioxidants and analysis of their free radical-scavenging mechanism by thermodynamic studies
title_sort in silico design of hydrazone antioxidants and analysis of their free radical-scavenging mechanism by thermodynamic studies
publisher SpringerOpen
series Beni-Suef University Journal of Basic and Applied Sciences
issn 2314-8543
publishDate 2019-10-01
description Abstract Background Antioxidants are very crucial in maintaining the normal function of body cells, as they scavenge excess free radical in the body. A set of hydrazone antioxidants was designed by in silico screening. The density functional theory (DFT) method was employed to explore the reaction energetics of their free radical-scavenging mechanism. With the aid of the developed quantitative structure-activity relationship (QSAR) model for hydrazone antioxidants, the structure and antioxidant activity of these compounds were predicted. Three potential reaction mechanisms were investigated, namely, hydrogen atom transfer (HAT), single-electron transfer followed by proton transfer (SET-PT) and sequential proton loss electron transfer (SPLET). Bond dissociation enthalpy (BDE), adiabatic ionization potential (AIP), proton dissociation enthalpy (PDE), proton affinity (PA), electron transfer enthalpy (ETE) and Gibbs free energy that characterize the various steps in these mechanisms were calculated in the gas phase. Results A total of 25 hydrazone antioxidants were designed, in which the molecule MHD 017 gave the best antioxidant activity. Among the tested molecules, MHD 017 at the 10-OH site gave the best results for the various thermodynamic parameters calculated. The reaction Gibbs free energy results also indicate that this is the most favoured site for free radical scavenge. Conclusion The obtained results show that HAT and SPLET mechanisms are the thermodynamically plausible reaction pathways of free radical scavenge by hydrazone antioxidants. The reactivity of these compounds towards the hydroperoxyl radical (HOO·) was greater than that towards the methyl peroxyl radical (CH3OO·) based on the exergonicity of the calculated reaction Gibbs free energy. Graphical abstract
topic Hydrazone
Free radical
Antioxidant
Scavenging mechanism
In silico design
url http://link.springer.com/article/10.1186/s43088-019-0011-2
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AT adamuuzairu insilicodesignofhydrazoneantioxidantsandanalysisoftheirfreeradicalscavengingmechanismbythermodynamicstudies
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