Swellix: a computational tool to explore RNA conformational space

Swellix: a computational tool to explore RNA conformational space

Abstract Background The sequence of nucleotides in an RNA determines the possible base pairs for an RNA fold and thus also determines the overall shape and function of an RNA. The Swellix program presented here combines a helix abstraction with a combinatorial approach to the RNA folding problem in...

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Bibliographic Details
Main Authors: Nathan Sloat, Jui-Wen Liu, Susan J. Schroeder
Format: Article
Language:English
Published: BMC 2017-11-01
Series:BMC Bioinformatics
Subjects:
RNA structure prediction
RNA ensembles
Conformational space
RNA motif search
Online Access:http://link.springer.com/article/10.1186/s12859-017-1910-7

Internet

http://link.springer.com/article/10.1186/s12859-017-1910-7

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