Comparison of Read Mapping and Variant Calling Tools for the Analysis of Plant NGS Data

Comparison of Read Mapping and Variant Calling Tools for the Analysis of Plant NGS Data

High-throughput sequencing technologies have rapidly developed during the past years and have become an essential tool in plant sciences. However, the analysis of genomic data remains challenging and relies mostly on the performance of automatic pipelines. Frequently applied pipelines involve the al...

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Bibliographic Details
Main Authors: Hanna Marie Schilbert, Andreas Rempel, Boas Pucker
Format: Article
Language:English
Published: MDPI AG 2020-04-01
Series:Plants
Subjects:
Single Nucleotide Variants (SNVs)
Single Nucleotide Polymorphisms (SNPs)
Insertions/Deletions (InDels)
population genomics
re-sequencing
mapper
Online Access:https://www.mdpi.com/2223-7747/9/4/439

Internet

https://www.mdpi.com/2223-7747/9/4/439

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