Application of the PM6 semi-empirical method to modeling proteins enhances docking accuracy of AutoDock

<p>Abstract</p> <p>Background</p> <p>Molecular docking methods are commonly used for predicting binding modes and energies of ligands to proteins. For accurate complex geometry and binding energy estimation, an appropriate method for calculating partial charges is essen...

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Bibliographic Details
Main Authors: Bikadi Zsolt, Hazai Eszter
Format: Article
Language:English
Published: BMC 2009-09-01
Series:Journal of Cheminformatics
Online Access:http://www.jcheminf.com/content/1/1/15