doepipeline: a systematic approach to optimizing multi-level and multi-step data processing workflows

Abstract Background Selecting the proper parameter settings for bioinformatic software tools is challenging. Not only will each parameter have an individual effect on the outcome, but there are also potential interaction effects between parameters. Both of these effects may be difficult to predict....

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Bibliographic Details
Main Authors: Daniel Svensson, Rickard Sjögren, David Sundell, Andreas Sjödin, Johan Trygg
Format: Article
Language:English
Published: BMC 2019-10-01
Series:BMC Bioinformatics
Subjects:
Online Access:http://link.springer.com/article/10.1186/s12859-019-3091-z