A Coarse-Grained DNA Model Parameterized from Atomistic Simulations by Inverse Monte Carlo

A Coarse-Grained DNA Model Parameterized from Atomistic Simulations by Inverse Monte Carlo

Computer modeling of very large biomolecular systems, such as long DNA polyelectrolytes or protein-DNA complex-like chromatin cannot reach all-atom resolution in a foreseeable future and this necessitates the development of coarse-grained (CG) approximations. DNA is both highly charged and mechanica...

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Bibliographic Details
Main Authors: Nikolay Korolev, Di Luo, Alexander P. Lyubartsev, Lars Nordenskiöld
Format: Article
Language:English
Published: MDPI AG 2014-05-01
Series:Polymers
Subjects:
DNA
coarse-grained model
molecular dynamics
persistence length
Online Access:http://www.mdpi.com/2073-4360/6/6/1655

Internet

http://www.mdpi.com/2073-4360/6/6/1655

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