Sources of Variation in Ancestral Sequence Reconstruction for HIV-1 Envelope Genes
We characterized the variation in the reconstructed ancestor of 118 HIV-1 envelope gene sequences arising from the methods used for (a) estimating and (b) rooting the phylogenetic tree, and (c) reconstructing the ancestor on that tree, from (d) the sequence format, and from (e) the number of input s...
Main Authors: | , , , , , , |
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Format: | Article |
Language: | English |
Published: |
SAGE Publishing
2006-01-01
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Series: | Evolutionary Bioinformatics |
Online Access: | https://doi.org/10.1177/117693430600200027 |