Equiprobable discrete models of site-specific substitution rates underestimate the extent of rate variability.

It is standard practice to model site-to-site variability of substitution rates by discretizing a continuous distribution into a small number, K, of equiprobable rate categories. We demonstrate that the variance of this discretized distribution has an upper bound determined solely by the choice of K...

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Bibliographic Details
Main Authors: Frank Mannino, Sadie Wisotsky, Sergei L Kosakovsky Pond, Spencer V Muse
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2020-01-01
Series:PLoS ONE
Online Access:https://doi.org/10.1371/journal.pone.0229493