Tree reconciliation combined with subsampling improves large scale inference of orthologous group hierarchies

Tree reconciliation combined with subsampling improves large scale inference of orthologous group hierarchies

Abstract Background An orthologous group (OG) comprises a set of orthologous and paralogous genes that share a last common ancestor (LCA). OGs are defined with respect to a chosen taxonomic level, which delimits the position of the LCA in time to a specified speciation event. A hierarchy of OGs expa...

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Bibliographic Details
Main Authors: Davide Heller, Damian Szklarczyk, Christian von Mering
Format: Article
Language:English
Published: BMC 2019-05-01
Series:BMC Bioinformatics
Subjects:
Tree reconciliation
Consistency
Orthologous groups
Online Access:http://link.springer.com/article/10.1186/s12859-019-2828-z

Internet

http://link.springer.com/article/10.1186/s12859-019-2828-z

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