Large-scale deployment of a rice 6 K SNP array for genetics and breeding applications

Large-scale deployment of a rice 6 K SNP array for genetics and breeding applications

Abstract Background Fixed arrays of single nucleotide polymorphism (SNP) markers have advantages over reduced representation sequencing in their ease of data analysis, consistently higher call rates, and rapid turnaround times. A 6 K SNP array represents a cost-benefit “sweet spot” for routine genet...

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Bibliographic Details
Main Authors: Michael J. Thomson, Namrata Singh, Maria S. Dwiyanti, Diane R. Wang, Mark H. Wright, Francisco Agosto Perez, Genevieve DeClerck, Joong Hyoun Chin, Geraldine A. Malitic-Layaoen, Venice Margarette Juanillas, Christine J. Dilla-Ermita, Ramil Mauleon, Tobias Kretzschmar, Susan R. McCouch
Format: Article
Language:English
Published: SpringerOpen 2017-08-01
Series:Rice
Subjects:
Oryza sativa
O. rufipogon
Single nucleotide polymorphism (SNP)
High-throughput genotyping
Rice diversity
SNP fingerprinting
Online Access:http://link.springer.com/article/10.1186/s12284-017-0181-2

Internet

http://link.springer.com/article/10.1186/s12284-017-0181-2

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