tsiR: An R package for time-series Susceptible-Infected-Recovered models of epidemics.

tsiR is an open source software package implemented in the R programming language designed to analyze infectious disease time-series data. The software extends a well-studied and widely-applied algorithm, the time-series Susceptible-Infected-Recovered (TSIR) model, to infer parameters from incidence...

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Bibliographic Details
Main Authors: Alexander D Becker, Bryan T Grenfell
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2017-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC5619791?pdf=render