Genomic Prediction Using LD-Based Haplotypes Inferred From High-Density Chip and Imputed Sequence Variants in Chinese Simmental Beef Cattle

Genomic Prediction Using LD-Based Haplotypes Inferred From High-Density Chip and Imputed Sequence Variants in Chinese Simmental Beef Cattle

A haplotype is defined as a combination of alleles at adjacent loci belonging to the same chromosome that can be transmitted as a unit. In this study, we used both the Illumina BovineHD chip (HD chip) and imputed whole-genome sequence (WGS) data to explore haploblocks and assess haplotype effects, a...

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Bibliographic Details
Main Authors: Hongwei Li, Bo Zhu, Ling Xu, Zezhao Wang, Lei Xu, Peinuo Zhou, Han Gao, Peng Guo, Yan Chen, Xue Gao, Lupei Zhang, Huijiang Gao, Wentao Cai, Lingyang Xu, Junya Li
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-07-01
Series:Frontiers in Genetics
Subjects:
genomic prediction
prediction accuracy
LD
haplotype
Chinese Simmental beef cattle
Online Access:https://www.frontiersin.org/articles/10.3389/fgene.2021.665382/full

Internet

https://www.frontiersin.org/articles/10.3389/fgene.2021.665382/full

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