microCLIP super learning framework uncovers functional transcriptome-wide miRNA interactions

AGO-PAR-CLIP is widely used for high-throughput miRNA target characterization. Here, the authors show that the previously neglected non-T-to-C clusters denote functional miRNA binding events, and develop microCLIP, a super learning framework that accurately detects miRNA interactions.

Bibliographic Details
Main Authors: Maria D. Paraskevopoulou, Dimitra Karagkouni, Ioannis S. Vlachos, Spyros Tastsoglou, Artemis G. Hatzigeorgiou
Format: Article
Language:English
Published: Nature Publishing Group 2018-09-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-018-06046-y