Feature selection for RNA cleavage efficiency at specific sites using the LASSO regression model in Arabidopsis thaliana

Feature selection for RNA cleavage efficiency at specific sites using the LASSO regression model in Arabidopsis thaliana

Abstract Background RNA degradation is important for the regulation of gene expression. Despite the identification of proteins and sequences related to deadenylation-dependent RNA degradation in plants, endonucleolytic cleavage-dependent RNA degradation has not been studied in detail. Here, we devel...

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Bibliographic Details
Main Authors: Daishin Ueno, Harunori Kawabe, Shotaro Yamasaki, Taku Demura, Ko Kato
Format: Article
Language:English
Published: BMC 2021-07-01
Series:BMC Bioinformatics
Subjects:
RNA degradation
Degradome sequencing
LASSO
Online Access:https://doi.org/10.1186/s12859-021-04291-5

Internet

https://doi.org/10.1186/s12859-021-04291-5

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