Application of shotgun metagenomics to smoked salmon experimentally spiked: Comparison between sequencing and microbiological data using different bioinformatic approaches

The aims of this study were i) to evaluate the possibility to detect and possibly quantify microorganisms belonging to different domains experimentally spiked in smoked salmon at known concentrations using shotgun metagenomics; ii) to compare the sequencing results using four bioinformatic tools. T...

Full description

Bibliographic Details
Main Authors: Alessandra De Cesare, Chiara Oliveri, Alex Lucchi, Frederique Pasquali, Gerardo Manfreda
Format: Article
Language:English
Published: PAGEPress Publications 2019-12-01
Series:Italian Journal of Food Safety
Subjects:
Online Access:https://www.pagepressjournals.org/index.php/ijfs/article/view/8462