Engineered Biosynthesis of Alkyne-Tagged Polyketides by Type I PKSs
Summary: Polyketides produced by modular polyketide synthases (PKSs) are important small molecules widely used as drugs, pesticides, and biological probes. Tagging these polyketides with a clickable functionality enables the visualization, diversification, and mode of action study through bio-orthog...
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doaj-ae9c4c73cfce451d90e8c022248106e02020-11-25T01:54:55ZengElsevieriScience2589-00422020-03-01233Engineered Biosynthesis of Alkyne-Tagged Polyketides by Type I PKSsWilliam B. Porterfield0Nannalin Poenateetai1Wenjun Zhang2Department of Chemical and Biomolecular Engineering, University of California, Berkeley, CA 94709, USADepartment of Chemical and Biomolecular Engineering, University of California, Berkeley, CA 94709, USADepartment of Chemical and Biomolecular Engineering, University of California, Berkeley, CA 94709, USA; Chan Zuckerberg Biohub, San Francisco, CA 94158, USA; Corresponding authorSummary: Polyketides produced by modular polyketide synthases (PKSs) are important small molecules widely used as drugs, pesticides, and biological probes. Tagging these polyketides with a clickable functionality enables the visualization, diversification, and mode of action study through bio-orthogonal chemistry. We report the de novo biosynthesis of alkyne-tagged polyketides by modular type I PKSs through starter unit engineering. Specifically, we use JamABC, a terminal alkyne biosynthetic machinery from the jamaicamide B biosynthetic pathway, in combination with representative modular PKSs. We demonstrate that JamABC works as a trans loading system for engineered type I PKSs to produce alkyne-tagged polyketides. In addition, the production efficiency can be improved by enhancing the interactions between the carrier protein (JamC) and PKSs using docking domains and site-directed mutagenesis of JamC. This work thus provides engineering guidelines and strategies that are applicable to additional modular type I PKSs to produce targeted alkyne-tagged metabolites for chemical and biological applications. : Chemical Engineering; Biochemical Engineering; Metabolic Engineering; Biotechnology Subject Areas: Chemical Engineering, Biochemical Engineering, Metabolic Engineering, Biotechnologyhttp://www.sciencedirect.com/science/article/pii/S258900422030122X |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
William B. Porterfield Nannalin Poenateetai Wenjun Zhang |
spellingShingle |
William B. Porterfield Nannalin Poenateetai Wenjun Zhang Engineered Biosynthesis of Alkyne-Tagged Polyketides by Type I PKSs iScience |
author_facet |
William B. Porterfield Nannalin Poenateetai Wenjun Zhang |
author_sort |
William B. Porterfield |
title |
Engineered Biosynthesis of Alkyne-Tagged Polyketides by Type I PKSs |
title_short |
Engineered Biosynthesis of Alkyne-Tagged Polyketides by Type I PKSs |
title_full |
Engineered Biosynthesis of Alkyne-Tagged Polyketides by Type I PKSs |
title_fullStr |
Engineered Biosynthesis of Alkyne-Tagged Polyketides by Type I PKSs |
title_full_unstemmed |
Engineered Biosynthesis of Alkyne-Tagged Polyketides by Type I PKSs |
title_sort |
engineered biosynthesis of alkyne-tagged polyketides by type i pkss |
publisher |
Elsevier |
series |
iScience |
issn |
2589-0042 |
publishDate |
2020-03-01 |
description |
Summary: Polyketides produced by modular polyketide synthases (PKSs) are important small molecules widely used as drugs, pesticides, and biological probes. Tagging these polyketides with a clickable functionality enables the visualization, diversification, and mode of action study through bio-orthogonal chemistry. We report the de novo biosynthesis of alkyne-tagged polyketides by modular type I PKSs through starter unit engineering. Specifically, we use JamABC, a terminal alkyne biosynthetic machinery from the jamaicamide B biosynthetic pathway, in combination with representative modular PKSs. We demonstrate that JamABC works as a trans loading system for engineered type I PKSs to produce alkyne-tagged polyketides. In addition, the production efficiency can be improved by enhancing the interactions between the carrier protein (JamC) and PKSs using docking domains and site-directed mutagenesis of JamC. This work thus provides engineering guidelines and strategies that are applicable to additional modular type I PKSs to produce targeted alkyne-tagged metabolites for chemical and biological applications. : Chemical Engineering; Biochemical Engineering; Metabolic Engineering; Biotechnology Subject Areas: Chemical Engineering, Biochemical Engineering, Metabolic Engineering, Biotechnology |
url |
http://www.sciencedirect.com/science/article/pii/S258900422030122X |
work_keys_str_mv |
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