Engineered Biosynthesis of Alkyne-Tagged Polyketides by Type I PKSs

Summary: Polyketides produced by modular polyketide synthases (PKSs) are important small molecules widely used as drugs, pesticides, and biological probes. Tagging these polyketides with a clickable functionality enables the visualization, diversification, and mode of action study through bio-orthog...

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Main Authors: William B. Porterfield, Nannalin Poenateetai, Wenjun Zhang
Format: Article
Language:English
Published: Elsevier 2020-03-01
Series:iScience
Online Access:http://www.sciencedirect.com/science/article/pii/S258900422030122X
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spelling doaj-ae9c4c73cfce451d90e8c022248106e02020-11-25T01:54:55ZengElsevieriScience2589-00422020-03-01233Engineered Biosynthesis of Alkyne-Tagged Polyketides by Type I PKSsWilliam B. Porterfield0Nannalin Poenateetai1Wenjun Zhang2Department of Chemical and Biomolecular Engineering, University of California, Berkeley, CA 94709, USADepartment of Chemical and Biomolecular Engineering, University of California, Berkeley, CA 94709, USADepartment of Chemical and Biomolecular Engineering, University of California, Berkeley, CA 94709, USA; Chan Zuckerberg Biohub, San Francisco, CA 94158, USA; Corresponding authorSummary: Polyketides produced by modular polyketide synthases (PKSs) are important small molecules widely used as drugs, pesticides, and biological probes. Tagging these polyketides with a clickable functionality enables the visualization, diversification, and mode of action study through bio-orthogonal chemistry. We report the de novo biosynthesis of alkyne-tagged polyketides by modular type I PKSs through starter unit engineering. Specifically, we use JamABC, a terminal alkyne biosynthetic machinery from the jamaicamide B biosynthetic pathway, in combination with representative modular PKSs. We demonstrate that JamABC works as a trans loading system for engineered type I PKSs to produce alkyne-tagged polyketides. In addition, the production efficiency can be improved by enhancing the interactions between the carrier protein (JamC) and PKSs using docking domains and site-directed mutagenesis of JamC. This work thus provides engineering guidelines and strategies that are applicable to additional modular type I PKSs to produce targeted alkyne-tagged metabolites for chemical and biological applications. : Chemical Engineering; Biochemical Engineering; Metabolic Engineering; Biotechnology Subject Areas: Chemical Engineering, Biochemical Engineering, Metabolic Engineering, Biotechnologyhttp://www.sciencedirect.com/science/article/pii/S258900422030122X
collection DOAJ
language English
format Article
sources DOAJ
author William B. Porterfield
Nannalin Poenateetai
Wenjun Zhang
spellingShingle William B. Porterfield
Nannalin Poenateetai
Wenjun Zhang
Engineered Biosynthesis of Alkyne-Tagged Polyketides by Type I PKSs
iScience
author_facet William B. Porterfield
Nannalin Poenateetai
Wenjun Zhang
author_sort William B. Porterfield
title Engineered Biosynthesis of Alkyne-Tagged Polyketides by Type I PKSs
title_short Engineered Biosynthesis of Alkyne-Tagged Polyketides by Type I PKSs
title_full Engineered Biosynthesis of Alkyne-Tagged Polyketides by Type I PKSs
title_fullStr Engineered Biosynthesis of Alkyne-Tagged Polyketides by Type I PKSs
title_full_unstemmed Engineered Biosynthesis of Alkyne-Tagged Polyketides by Type I PKSs
title_sort engineered biosynthesis of alkyne-tagged polyketides by type i pkss
publisher Elsevier
series iScience
issn 2589-0042
publishDate 2020-03-01
description Summary: Polyketides produced by modular polyketide synthases (PKSs) are important small molecules widely used as drugs, pesticides, and biological probes. Tagging these polyketides with a clickable functionality enables the visualization, diversification, and mode of action study through bio-orthogonal chemistry. We report the de novo biosynthesis of alkyne-tagged polyketides by modular type I PKSs through starter unit engineering. Specifically, we use JamABC, a terminal alkyne biosynthetic machinery from the jamaicamide B biosynthetic pathway, in combination with representative modular PKSs. We demonstrate that JamABC works as a trans loading system for engineered type I PKSs to produce alkyne-tagged polyketides. In addition, the production efficiency can be improved by enhancing the interactions between the carrier protein (JamC) and PKSs using docking domains and site-directed mutagenesis of JamC. This work thus provides engineering guidelines and strategies that are applicable to additional modular type I PKSs to produce targeted alkyne-tagged metabolites for chemical and biological applications. : Chemical Engineering; Biochemical Engineering; Metabolic Engineering; Biotechnology Subject Areas: Chemical Engineering, Biochemical Engineering, Metabolic Engineering, Biotechnology
url http://www.sciencedirect.com/science/article/pii/S258900422030122X
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