An Efficient Ligation Method in the Making of an in vitro Virus for in vitro Protein Evolution

<p>The <it>&ldquo;in vitro</it> virus&rdquo; is a molecular construct to perform evolutionary protein engineering. The &ldquo;virion (=viral particle)&rdquo; (mRNA-peptide fusion), is made by bonding a nascent protein with its coding mRNA via puromycin in a test tub...

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Bibliographic Details
Main Authors: Tabuchi Ichiro, Soramoto Sayaka, Suzuki Miho, Nishigaki Koichi, Nemoto Naoto, Husimi Yuzuru
Format: Article
Language:English
Published: BMC 2002-01-01
Series:Biological Procedures Online
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Online Access:http://www.biologicalprocedures.com/bpo/arts/1/33/m33.htm
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Summary:<p>The <it>&ldquo;in vitro</it> virus&rdquo; is a molecular construct to perform evolutionary protein engineering. The &ldquo;virion (=viral particle)&rdquo; (mRNA-peptide fusion), is made by bonding a nascent protein with its coding mRNA via puromycin in a test tube for <it>in vitro</it> translation. In this work, the puromycin-linker was attached to mRNA using the Y-ligation, which was a method of two single-strands ligation at the end of a double-stranded stem to make a stem-loop structure. This reaction gave a yield of about 95%. We compared the Y-ligation with two other ligation reactions and showed that the Y-ligation gave the best productivity. An efficient amplification of the <it>in vitro</it> virus with this &ldquo;viral genome&rdquo; was demonstrated.
ISSN:1480-9222