MICRA: an automatic pipeline for fast characterization of microbial genomes from high-throughput sequencing data

MICRA: an automatic pipeline for fast characterization of microbial genomes from high-throughput sequencing data

Abstract The increase in available sequence data has advanced the field of microbiology; however, making sense of these data without bioinformatics skills is still problematic. We describe MICRA, an automatic pipeline, available as a web interface, for microbial identification and characterization t...

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Bibliographic Details
Main Authors: Ségolène Caboche, Gaël Even, Alexandre Loywick, Christophe Audebert, David Hot
Format: Article
Language:English
Published: BMC 2017-12-01
Series:Genome Biology
Subjects:
Bioinformatics pipeline
Comparative genomics
Microbial genome characterization
High-throughput sequencing
Online Access:http://link.springer.com/article/10.1186/s13059-017-1367-z

Internet

http://link.springer.com/article/10.1186/s13059-017-1367-z

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