Automatic Quantification of Immunohistochemically Stained Cell Nuclei Using Unsupervised Image Analysis
A method for quantification of images of immunohistochemically stained cell nuclei by computing area proportions is presented. The image is transformed by a principal component transform. The resulting first component image is used to segment the objects from the background using dynamic thresholdin...
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Hindawi Limited
1998-01-01
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Series: | Analytical Cellular Pathology |
Online Access: | http://dx.doi.org/10.1155/1998/608293 |
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doaj-aba2c564f50945738899cd66c8c9f68b2020-11-24T22:25:50ZengHindawi LimitedAnalytical Cellular Pathology0921-89121878-36511998-01-01161294310.1155/1998/608293Automatic Quantification of Immunohistochemically Stained Cell Nuclei Using Unsupervised Image AnalysisPetter Ranefall0Kenneth Wester1Ewert Bengtsson2Centre for Image Analysis, Uppsala University, SwedenDepartment of Pathology, Uppsala University, SwedenCentre for Image Analysis, Uppsala University, SwedenA method for quantification of images of immunohistochemically stained cell nuclei by computing area proportions is presented. The image is transformed by a principal component transform. The resulting first component image is used to segment the objects from the background using dynamic thresholding of the P2/A‐histogram, where P2/A is a global roundness measure. Then the image is transformed into principal component hue, defined as the angle around the first principal component. This image is used to segment positive and negative objects. The method is fully automatic and the principal component approach makes it robust with respect to illumination and focus settings. An independent test set consisting of images grabbed with different focus and illumination for each field of view was used to test the method, and the proposed method showed less variation than the intraoperator variation using supervised Maximum Likelihood classification.http://dx.doi.org/10.1155/1998/608293 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Petter Ranefall Kenneth Wester Ewert Bengtsson |
spellingShingle |
Petter Ranefall Kenneth Wester Ewert Bengtsson Automatic Quantification of Immunohistochemically Stained Cell Nuclei Using Unsupervised Image Analysis Analytical Cellular Pathology |
author_facet |
Petter Ranefall Kenneth Wester Ewert Bengtsson |
author_sort |
Petter Ranefall |
title |
Automatic Quantification of Immunohistochemically Stained Cell Nuclei Using Unsupervised Image Analysis |
title_short |
Automatic Quantification of Immunohistochemically Stained Cell Nuclei Using Unsupervised Image Analysis |
title_full |
Automatic Quantification of Immunohistochemically Stained Cell Nuclei Using Unsupervised Image Analysis |
title_fullStr |
Automatic Quantification of Immunohistochemically Stained Cell Nuclei Using Unsupervised Image Analysis |
title_full_unstemmed |
Automatic Quantification of Immunohistochemically Stained Cell Nuclei Using Unsupervised Image Analysis |
title_sort |
automatic quantification of immunohistochemically stained cell nuclei using unsupervised image analysis |
publisher |
Hindawi Limited |
series |
Analytical Cellular Pathology |
issn |
0921-8912 1878-3651 |
publishDate |
1998-01-01 |
description |
A method for quantification of images of immunohistochemically stained cell nuclei by computing area proportions is presented. The image is transformed by a principal component transform. The resulting first component image is used to segment the objects from the background using dynamic thresholding of the P2/A‐histogram, where P2/A is a global roundness measure. Then the image is transformed into principal component hue, defined as the angle around the first principal component. This image is used to segment positive and negative objects. The method is fully automatic and the principal component approach makes it robust with respect to illumination and focus settings. An independent test set consisting of images grabbed with different focus and illumination for each field of view was used to test the method, and the proposed method showed less variation than the intraoperator variation using supervised Maximum Likelihood classification. |
url |
http://dx.doi.org/10.1155/1998/608293 |
work_keys_str_mv |
AT petterranefall automaticquantificationofimmunohistochemicallystainedcellnucleiusingunsupervisedimageanalysis AT kennethwester automaticquantificationofimmunohistochemicallystainedcellnucleiusingunsupervisedimageanalysis AT ewertbengtsson automaticquantificationofimmunohistochemicallystainedcellnucleiusingunsupervisedimageanalysis |
_version_ |
1725756055337566208 |