GRASP2: fast and memory-efficient gene-centric assembly and homolog search for metagenomic sequencing data
Abstract Background A crucial task in metagenomic analysis is to annotate the function and taxonomy of the sequencing reads generated from a microbiome sample. In general, the reads can either be assembled into contigs and searched against reference databases, or individually searched without assemb...
| Main Authors: | , , |
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| Format: | Article |
| Language: | English |
| Published: |
BMC
2019-06-01
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| Series: | BMC Bioinformatics |
| Online Access: | http://link.springer.com/article/10.1186/s12859-019-2818-1 |