GPrank: an R package for detecting dynamic elements from genome-wide time series

GPrank: an R package for detecting dynamic elements from genome-wide time series

Abstract Background Genome-wide high-throughput sequencing (HTS) time series experiments are a powerful tool for monitoring various genomic elements over time. They can be used to monitor, for example, gene or transcript expression with RNA sequencing (RNA-seq), DNA methylation levels with bisulfite...

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Bibliographic Details
Main Authors: Hande Topa, Antti Honkela
Format: Article
Language:English
Published: BMC 2018-10-01
Series:BMC Bioinformatics
Subjects:
Gaussian process
High-throughput sequencing
Time series
Ranking
Bayes factor
Visualization
Online Access:http://link.springer.com/article/10.1186/s12859-018-2370-4

Internet

http://link.springer.com/article/10.1186/s12859-018-2370-4

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