Bottom-Up Coarse-Grained Modeling of DNA

Bottom-Up Coarse-Grained Modeling of DNA

Recent advances in methodology enable effective coarse-grained modeling of deoxyribonucleic acid (DNA) based on underlying atomistic force field simulations. The so-called bottom-up coarse-graining practice separates fast and slow dynamic processes in molecular systems by averaging out fast degrees...

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Bibliographic Details
Main Authors: Tiedong Sun, Vishal Minhas, Nikolay Korolev, Alexander Mirzoev, Alexander P. Lyubartsev, Lars Nordenskiöld
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-03-01
Series:Frontiers in Molecular Biosciences
Subjects:
DNA condensation
coarse-grained model
molecular renormalization group
inverse Monte Carlo
multi-scale coarse-graining
force matching
Online Access:https://www.frontiersin.org/articles/10.3389/fmolb.2021.645527/full

Internet

https://www.frontiersin.org/articles/10.3389/fmolb.2021.645527/full

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