Antibiotic resistance and metabolic profiles as functional biomarkers that accurately predict the geographic origin of city metagenomics samples

Antibiotic resistance and metabolic profiles as functional biomarkers that accurately predict the geographic origin of city metagenomics samples

Abstract Background The availability of hundreds of city microbiome profiles allows the development of increasingly accurate predictors of the origin of a sample based on its microbiota composition. Typical microbiome studies involve the analysis of bacterial abundance profiles. Results Here we use...

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Bibliographic Details
Main Authors: Carlos S. Casimiro-Soriguer, Carlos Loucera, Javier Perez Florido, Daniel López-López, Joaquin Dopazo
Format: Article
Language:English
Published: BMC 2019-08-01
Series:Biology Direct
Subjects:
Machine learning
Classification
Metagenomics
Whole genome sequencing
Functional profiling
Antibiotic resistance
Online Access:http://link.springer.com/article/10.1186/s13062-019-0246-9

Internet

http://link.springer.com/article/10.1186/s13062-019-0246-9

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