Assessment of Viral Targeted Sequence Capture Using Nanopore Sequencing Directly from Clinical Samples

Assessment of Viral Targeted Sequence Capture Using Nanopore Sequencing Directly from Clinical Samples

Shotgun metagenomic sequencing (SMg) enables the simultaneous detection and characterization of viruses in human, animal and environmental samples. However, lack of sensitivity still poses a challenge and may lead to poor detection and data acquisition for detailed analysis. To improve sensitivity,...

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Bibliographic Details
Main Authors: Leonard Schuele, Hayley Cassidy, Erley Lizarazo, Katrin Strutzberg-Minder, Sabine Schuetze, Sandra Loebert, Claudia Lambrecht, Juergen Harlizius, Alex W. Friedrich, Silke Peter, Hubert G. M. Niesters, John W. A. Rossen, Natacha Couto
Format: Article
Language:English
Published: MDPI AG 2020-11-01
Series:Viruses
Subjects:
next-generation sequencing
one health
shotgun metagenomic sequencing
porcine viruses
targeted sequence capture
viral metagenomics
Online Access:https://www.mdpi.com/1999-4915/12/12/1358

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https://www.mdpi.com/1999-4915/12/12/1358

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