Evaluation of the impact of single-nucleotide polymorphisms on treatment response, survival and toxicity with cytarabine and anthracyclines in patients with acute myeloid leukaemia: a systematic review protocol

Abstract Introduction Acute myeloid leukaemia is the most common type of acute leukaemia in the world. Thus, the study of genetic alterations, such as single-nucleotide polymorphisms (SNPs), has contributed to a better understanding of the mechanisms underlying leukaemogenesis, to improve the progno...

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Main Authors: Taynah Cascaes Puty, Jonathan Souza Sarraf, Tabata Cristina Do Carmo Almeida, Valter Cordeiro Barbosa Filho, Luis Eduardo Werneck de Carvalho, Fernando Luiz Affonso Fonseca, Fernando Adami
Format: Article
Language:English
Published: BMC 2019-05-01
Series:Systematic Reviews
Subjects:
SNP
Online Access:http://link.springer.com/article/10.1186/s13643-019-1011-y
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spelling doaj-7952d76eddd74403bc1de92386168ce32020-11-25T02:12:52ZengBMCSystematic Reviews2046-40532019-05-01811810.1186/s13643-019-1011-yEvaluation of the impact of single-nucleotide polymorphisms on treatment response, survival and toxicity with cytarabine and anthracyclines in patients with acute myeloid leukaemia: a systematic review protocolTaynah Cascaes Puty0Jonathan Souza Sarraf1Tabata Cristina Do Carmo Almeida2Valter Cordeiro Barbosa Filho3Luis Eduardo Werneck de Carvalho4Fernando Luiz Affonso Fonseca5Fernando Adami6Ensino e Pesquisa, Oncológica do Brasil Ensino e PesquisaEnsino e Pesquisa, Oncológica do Brasil Ensino e PesquisaLaboratório de Epidemiologia e Análise de Dados, Faculdade de Medicina do ABCFederal Institute of Education, Science and Technology of CearaEnsino e Pesquisa, Oncológica do Brasil Ensino e PesquisaLaboratório de Epidemiologia e Análise de Dados, Faculdade de Medicina do ABCLaboratório de Epidemiologia e Análise de Dados, Faculdade de Medicina do ABCAbstract Introduction Acute myeloid leukaemia is the most common type of acute leukaemia in the world. Thus, the study of genetic alterations, such as single-nucleotide polymorphisms (SNPs), has contributed to a better understanding of the mechanisms underlying leukaemogenesis, to improve the prognosis and to increase the survival of these patients. However, there is no synthesis of evidence in the literature evaluating the quality of evidence and the risk of bias in the studies such that the results can be translated. Thus, this systematic review protocol aims to assess the impact of SNPs on genes involved in the metabolism of cytarabine and anthracyclines with respect to survival, treatment response and toxicity in patients with AML. Methods This systematic review protocol is based on PRISMA guidelines and includes searches in six electronic databases, contact with authors, repositories of clinical trials, and cancer research. Studies published in peer-reviewed journals will be included if they meet the eligibility criteria: (a) samples composed of individuals of any age, of both sexes, with a diagnosis of AML, regardless of the time of diagnosis of disease; (b) participants who have undergone or are undergoing cytarabine- and anthracycline-associated chemotherapy or cytarabine-only chemotherapy; and (c) in vivo studies. Studies that include patients with promyelocytic leukaemia (Fab type 3) will be excluded because this disease has different treatment. The process of study selection, data extraction, and evaluation/synthesis will be performed in duplicate. Assessment of methodological quality and risk of bias will be performed using the Cochrane Risk of Bias Tool for randomized clinical studies and the Downs-Black Checklist for cohort and case-control studies. The synthesis of evidence will include the level of evidence based on the GRADE protocol. A meta-analysis of the association between SNPs and outcomes may be performed based on Cochrane guidelines. Discussion It is expected that clinical decisions for AML patients will consider evidence-based practices to contribute to better patient management. In this way, we will be able to define how to treat patients with AML to improve their survival and quality of life. Systematic review registration PROSPERO CRD42018100750http://link.springer.com/article/10.1186/s13643-019-1011-ySNPStandard chemotherapyAcute myeloid leukaemiaSurvivalToxicity
collection DOAJ
language English
format Article
sources DOAJ
author Taynah Cascaes Puty
Jonathan Souza Sarraf
Tabata Cristina Do Carmo Almeida
Valter Cordeiro Barbosa Filho
Luis Eduardo Werneck de Carvalho
Fernando Luiz Affonso Fonseca
Fernando Adami
spellingShingle Taynah Cascaes Puty
Jonathan Souza Sarraf
Tabata Cristina Do Carmo Almeida
Valter Cordeiro Barbosa Filho
Luis Eduardo Werneck de Carvalho
Fernando Luiz Affonso Fonseca
Fernando Adami
Evaluation of the impact of single-nucleotide polymorphisms on treatment response, survival and toxicity with cytarabine and anthracyclines in patients with acute myeloid leukaemia: a systematic review protocol
Systematic Reviews
SNP
Standard chemotherapy
Acute myeloid leukaemia
Survival
Toxicity
author_facet Taynah Cascaes Puty
Jonathan Souza Sarraf
Tabata Cristina Do Carmo Almeida
Valter Cordeiro Barbosa Filho
Luis Eduardo Werneck de Carvalho
Fernando Luiz Affonso Fonseca
Fernando Adami
author_sort Taynah Cascaes Puty
title Evaluation of the impact of single-nucleotide polymorphisms on treatment response, survival and toxicity with cytarabine and anthracyclines in patients with acute myeloid leukaemia: a systematic review protocol
title_short Evaluation of the impact of single-nucleotide polymorphisms on treatment response, survival and toxicity with cytarabine and anthracyclines in patients with acute myeloid leukaemia: a systematic review protocol
title_full Evaluation of the impact of single-nucleotide polymorphisms on treatment response, survival and toxicity with cytarabine and anthracyclines in patients with acute myeloid leukaemia: a systematic review protocol
title_fullStr Evaluation of the impact of single-nucleotide polymorphisms on treatment response, survival and toxicity with cytarabine and anthracyclines in patients with acute myeloid leukaemia: a systematic review protocol
title_full_unstemmed Evaluation of the impact of single-nucleotide polymorphisms on treatment response, survival and toxicity with cytarabine and anthracyclines in patients with acute myeloid leukaemia: a systematic review protocol
title_sort evaluation of the impact of single-nucleotide polymorphisms on treatment response, survival and toxicity with cytarabine and anthracyclines in patients with acute myeloid leukaemia: a systematic review protocol
publisher BMC
series Systematic Reviews
issn 2046-4053
publishDate 2019-05-01
description Abstract Introduction Acute myeloid leukaemia is the most common type of acute leukaemia in the world. Thus, the study of genetic alterations, such as single-nucleotide polymorphisms (SNPs), has contributed to a better understanding of the mechanisms underlying leukaemogenesis, to improve the prognosis and to increase the survival of these patients. However, there is no synthesis of evidence in the literature evaluating the quality of evidence and the risk of bias in the studies such that the results can be translated. Thus, this systematic review protocol aims to assess the impact of SNPs on genes involved in the metabolism of cytarabine and anthracyclines with respect to survival, treatment response and toxicity in patients with AML. Methods This systematic review protocol is based on PRISMA guidelines and includes searches in six electronic databases, contact with authors, repositories of clinical trials, and cancer research. Studies published in peer-reviewed journals will be included if they meet the eligibility criteria: (a) samples composed of individuals of any age, of both sexes, with a diagnosis of AML, regardless of the time of diagnosis of disease; (b) participants who have undergone or are undergoing cytarabine- and anthracycline-associated chemotherapy or cytarabine-only chemotherapy; and (c) in vivo studies. Studies that include patients with promyelocytic leukaemia (Fab type 3) will be excluded because this disease has different treatment. The process of study selection, data extraction, and evaluation/synthesis will be performed in duplicate. Assessment of methodological quality and risk of bias will be performed using the Cochrane Risk of Bias Tool for randomized clinical studies and the Downs-Black Checklist for cohort and case-control studies. The synthesis of evidence will include the level of evidence based on the GRADE protocol. A meta-analysis of the association between SNPs and outcomes may be performed based on Cochrane guidelines. Discussion It is expected that clinical decisions for AML patients will consider evidence-based practices to contribute to better patient management. In this way, we will be able to define how to treat patients with AML to improve their survival and quality of life. Systematic review registration PROSPERO CRD42018100750
topic SNP
Standard chemotherapy
Acute myeloid leukaemia
Survival
Toxicity
url http://link.springer.com/article/10.1186/s13643-019-1011-y
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