Application of a Fluorescent Biosensor in Determining the Binding of 5-HT to Calmodulin
Here, we show the utility of the fluorescent biosensor <i>h</i>CaM-M124C-<i>mBBr</i> in detecting and determining the affinity of serotonin (5-HT). We obtained a <i>K</i><sub>d</sub> of 5-HT (0.71 μm) for the first time, the same order of magnitude as...
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doaj-7948a4b6271c4fb994e2f403d14def642021-09-25T23:54:18ZengMDPI AGChemosensors2227-90402021-09-01925025010.3390/chemosensors9090250Application of a Fluorescent Biosensor in Determining the Binding of 5-HT to CalmodulinL. X. Vásquez-Bochm0Isabel Velázquez-López1Rachel Mata2Alejandro Sosa-Peinado3Patricia Cano-Sánchez4Martin González-Andrade5Facultad de Química, Universidad Nacional Autónoma de México, Ciudad de México 04510, MexicoLaboratorio de Biosensores y Modelaje Molecular, Departamento de Bioquímica, Facultad de Medicina, Universidad Nacional Autónoma de México, Ciudad de México 04510, MexicoFacultad de Química, Universidad Nacional Autónoma de México, Ciudad de México 04510, MexicoLaboratorio de Biosensores y Modelaje Molecular, Departamento de Bioquímica, Facultad de Medicina, Universidad Nacional Autónoma de México, Ciudad de México 04510, MexicoInstituto de Química, Universidad Nacional Autónoma de México, Ciudad de México 04510, MexicoLaboratorio de Biosensores y Modelaje Molecular, Departamento de Bioquímica, Facultad de Medicina, Universidad Nacional Autónoma de México, Ciudad de México 04510, MexicoHere, we show the utility of the fluorescent biosensor <i>h</i>CaM-M124C-<i>mBBr</i> in detecting and determining the affinity of serotonin (5-HT). We obtained a <i>K</i><sub>d</sub> of 5-HT (0.71 μm) for the first time, the same order of magnitude as most anti-CaM drugs. This data can contribute to understanding the direct and indirect modulation of CaM on its binding proteins when the 5-HT concentration varies in different tissues or explain some of the side effects of anti-CaM drugs. On the other hand, molecular modeling tools help the rational design of biosensors and adequately complement the experimental results. For example, the docking study indicates that 5-HT binds at the same site as chlorpromazine (site 1) with a theoretical <i>K</i><sub>i</sub> of 2.84 μM; while the molecular dynamics simulations indicate a stability of the CaM–5-HT complex with a theoretical Δ<i>G</i> of −4.85 kcal mol<sup>−1</sup>, where the enthalpy contribution is greater. Thus, the combination of biotechnology and bioinformatics helps in the design and construction of more robust biosensors.https://www.mdpi.com/2227-9040/9/9/250biosensorcalmodulin5-HTdockingmolecular dynamic simulation |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
L. X. Vásquez-Bochm Isabel Velázquez-López Rachel Mata Alejandro Sosa-Peinado Patricia Cano-Sánchez Martin González-Andrade |
spellingShingle |
L. X. Vásquez-Bochm Isabel Velázquez-López Rachel Mata Alejandro Sosa-Peinado Patricia Cano-Sánchez Martin González-Andrade Application of a Fluorescent Biosensor in Determining the Binding of 5-HT to Calmodulin Chemosensors biosensor calmodulin 5-HT docking molecular dynamic simulation |
author_facet |
L. X. Vásquez-Bochm Isabel Velázquez-López Rachel Mata Alejandro Sosa-Peinado Patricia Cano-Sánchez Martin González-Andrade |
author_sort |
L. X. Vásquez-Bochm |
title |
Application of a Fluorescent Biosensor in Determining the Binding of 5-HT to Calmodulin |
title_short |
Application of a Fluorescent Biosensor in Determining the Binding of 5-HT to Calmodulin |
title_full |
Application of a Fluorescent Biosensor in Determining the Binding of 5-HT to Calmodulin |
title_fullStr |
Application of a Fluorescent Biosensor in Determining the Binding of 5-HT to Calmodulin |
title_full_unstemmed |
Application of a Fluorescent Biosensor in Determining the Binding of 5-HT to Calmodulin |
title_sort |
application of a fluorescent biosensor in determining the binding of 5-ht to calmodulin |
publisher |
MDPI AG |
series |
Chemosensors |
issn |
2227-9040 |
publishDate |
2021-09-01 |
description |
Here, we show the utility of the fluorescent biosensor <i>h</i>CaM-M124C-<i>mBBr</i> in detecting and determining the affinity of serotonin (5-HT). We obtained a <i>K</i><sub>d</sub> of 5-HT (0.71 μm) for the first time, the same order of magnitude as most anti-CaM drugs. This data can contribute to understanding the direct and indirect modulation of CaM on its binding proteins when the 5-HT concentration varies in different tissues or explain some of the side effects of anti-CaM drugs. On the other hand, molecular modeling tools help the rational design of biosensors and adequately complement the experimental results. For example, the docking study indicates that 5-HT binds at the same site as chlorpromazine (site 1) with a theoretical <i>K</i><sub>i</sub> of 2.84 μM; while the molecular dynamics simulations indicate a stability of the CaM–5-HT complex with a theoretical Δ<i>G</i> of −4.85 kcal mol<sup>−1</sup>, where the enthalpy contribution is greater. Thus, the combination of biotechnology and bioinformatics helps in the design and construction of more robust biosensors. |
topic |
biosensor calmodulin 5-HT docking molecular dynamic simulation |
url |
https://www.mdpi.com/2227-9040/9/9/250 |
work_keys_str_mv |
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