Application of a Fluorescent Biosensor in Determining the Binding of 5-HT to Calmodulin

Here, we show the utility of the fluorescent biosensor <i>h</i>CaM-M124C-<i>mBBr</i> in detecting and determining the affinity of serotonin (5-HT). We obtained a <i>K</i><sub>d</sub> of 5-HT (0.71 μm) for the first time, the same order of magnitude as...

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Main Authors: L. X. Vásquez-Bochm, Isabel Velázquez-López, Rachel Mata, Alejandro Sosa-Peinado, Patricia Cano-Sánchez, Martin González-Andrade
Format: Article
Language:English
Published: MDPI AG 2021-09-01
Series:Chemosensors
Subjects:
Online Access:https://www.mdpi.com/2227-9040/9/9/250
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spelling doaj-7948a4b6271c4fb994e2f403d14def642021-09-25T23:54:18ZengMDPI AGChemosensors2227-90402021-09-01925025010.3390/chemosensors9090250Application of a Fluorescent Biosensor in Determining the Binding of 5-HT to CalmodulinL. X. Vásquez-Bochm0Isabel Velázquez-López1Rachel Mata2Alejandro Sosa-Peinado3Patricia Cano-Sánchez4Martin González-Andrade5Facultad de Química, Universidad Nacional Autónoma de México, Ciudad de México 04510, MexicoLaboratorio de Biosensores y Modelaje Molecular, Departamento de Bioquímica, Facultad de Medicina, Universidad Nacional Autónoma de México, Ciudad de México 04510, MexicoFacultad de Química, Universidad Nacional Autónoma de México, Ciudad de México 04510, MexicoLaboratorio de Biosensores y Modelaje Molecular, Departamento de Bioquímica, Facultad de Medicina, Universidad Nacional Autónoma de México, Ciudad de México 04510, MexicoInstituto de Química, Universidad Nacional Autónoma de México, Ciudad de México 04510, MexicoLaboratorio de Biosensores y Modelaje Molecular, Departamento de Bioquímica, Facultad de Medicina, Universidad Nacional Autónoma de México, Ciudad de México 04510, MexicoHere, we show the utility of the fluorescent biosensor <i>h</i>CaM-M124C-<i>mBBr</i> in detecting and determining the affinity of serotonin (5-HT). We obtained a <i>K</i><sub>d</sub> of 5-HT (0.71 μm) for the first time, the same order of magnitude as most anti-CaM drugs. This data can contribute to understanding the direct and indirect modulation of CaM on its binding proteins when the 5-HT concentration varies in different tissues or explain some of the side effects of anti-CaM drugs. On the other hand, molecular modeling tools help the rational design of biosensors and adequately complement the experimental results. For example, the docking study indicates that 5-HT binds at the same site as chlorpromazine (site 1) with a theoretical <i>K</i><sub>i</sub> of 2.84 μM; while the molecular dynamics simulations indicate a stability of the CaM–5-HT complex with a theoretical Δ<i>G</i> of −4.85 kcal mol<sup>−1</sup>, where the enthalpy contribution is greater. Thus, the combination of biotechnology and bioinformatics helps in the design and construction of more robust biosensors.https://www.mdpi.com/2227-9040/9/9/250biosensorcalmodulin5-HTdockingmolecular dynamic simulation
collection DOAJ
language English
format Article
sources DOAJ
author L. X. Vásquez-Bochm
Isabel Velázquez-López
Rachel Mata
Alejandro Sosa-Peinado
Patricia Cano-Sánchez
Martin González-Andrade
spellingShingle L. X. Vásquez-Bochm
Isabel Velázquez-López
Rachel Mata
Alejandro Sosa-Peinado
Patricia Cano-Sánchez
Martin González-Andrade
Application of a Fluorescent Biosensor in Determining the Binding of 5-HT to Calmodulin
Chemosensors
biosensor
calmodulin
5-HT
docking
molecular dynamic simulation
author_facet L. X. Vásquez-Bochm
Isabel Velázquez-López
Rachel Mata
Alejandro Sosa-Peinado
Patricia Cano-Sánchez
Martin González-Andrade
author_sort L. X. Vásquez-Bochm
title Application of a Fluorescent Biosensor in Determining the Binding of 5-HT to Calmodulin
title_short Application of a Fluorescent Biosensor in Determining the Binding of 5-HT to Calmodulin
title_full Application of a Fluorescent Biosensor in Determining the Binding of 5-HT to Calmodulin
title_fullStr Application of a Fluorescent Biosensor in Determining the Binding of 5-HT to Calmodulin
title_full_unstemmed Application of a Fluorescent Biosensor in Determining the Binding of 5-HT to Calmodulin
title_sort application of a fluorescent biosensor in determining the binding of 5-ht to calmodulin
publisher MDPI AG
series Chemosensors
issn 2227-9040
publishDate 2021-09-01
description Here, we show the utility of the fluorescent biosensor <i>h</i>CaM-M124C-<i>mBBr</i> in detecting and determining the affinity of serotonin (5-HT). We obtained a <i>K</i><sub>d</sub> of 5-HT (0.71 μm) for the first time, the same order of magnitude as most anti-CaM drugs. This data can contribute to understanding the direct and indirect modulation of CaM on its binding proteins when the 5-HT concentration varies in different tissues or explain some of the side effects of anti-CaM drugs. On the other hand, molecular modeling tools help the rational design of biosensors and adequately complement the experimental results. For example, the docking study indicates that 5-HT binds at the same site as chlorpromazine (site 1) with a theoretical <i>K</i><sub>i</sub> of 2.84 μM; while the molecular dynamics simulations indicate a stability of the CaM–5-HT complex with a theoretical Δ<i>G</i> of −4.85 kcal mol<sup>−1</sup>, where the enthalpy contribution is greater. Thus, the combination of biotechnology and bioinformatics helps in the design and construction of more robust biosensors.
topic biosensor
calmodulin
5-HT
docking
molecular dynamic simulation
url https://www.mdpi.com/2227-9040/9/9/250
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