VariantStore: an index for large-scale genomic variant search
Abstract Efficiently scaling genomic variant search indexes to thousands of samples is computationally challenging due to the presence of multiple coordinate systems to avoid reference biases. We present VariantStore, a system that indexes genomic variants from multiple samples using a variation gra...
Main Authors: | Prashant Pandey, Yinjie Gao, Carl Kingsford |
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Format: | Article |
Language: | English |
Published: |
BMC
2021-08-01
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Series: | Genome Biology |
Subjects: | |
Online Access: | https://doi.org/10.1186/s13059-021-02442-8 |
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