Impact of alignment algorithm on the estimation of pairwise genetic similarity of porcine reproductive and respiratory syndrome virus (PRRSV)

Impact of alignment algorithm on the estimation of pairwise genetic similarity of porcine reproductive and respiratory syndrome virus (PRRSV)

Abstract Background Porcine reproductive and respiratory syndrome (PRRS) is a major threat to the swine industry. It is caused by the PRRS virus (PRRSV). Determination and comparison of the nucleotide sequences of PRRSV strains provides useful information in support of control initiatives or epidemi...

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Bibliographic Details
Main Authors: Marie-Ève Lambert, Julie Arsenault, Benjamin Delisle, Pascal Audet, Zvonimir Poljak, Sylvie D’Allaire
Format: Article
Language:English
Published: BMC 2019-05-01
Series:BMC Veterinary Research
Subjects:
Porcine reproductive and respiratory syndrome virus
PRRS
Alignment algorithm
Sequence
Genetic similarity
Online Access:http://link.springer.com/article/10.1186/s12917-019-1890-0

Internet

http://link.springer.com/article/10.1186/s12917-019-1890-0

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