RNA binding protein FXR1-miR301a-3p axis contributes to p21WAF1 degradation in oral cancer.

RNA-binding proteins (RBPs) associate with the primary, precursor, and mature microRNAs, which in turn control post-transcriptional gene regulation. Here, by small RNAseq, we show that RBP FXR1 controls the expression of a subset of mature miRNAs, including highly expressed miR301a-3p in oral cancer...

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Main Authors: Mrinmoyee Majumder, Viswanathan Palanisamy
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2020-01-01
Series:PLoS Genetics
Online Access:https://doi.org/10.1371/journal.pgen.1008580
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spelling doaj-63651b0a0f024c35aa7694593eeaebfb2021-04-21T13:50:21ZengPublic Library of Science (PLoS)PLoS Genetics1553-73901553-74042020-01-01161e100858010.1371/journal.pgen.1008580RNA binding protein FXR1-miR301a-3p axis contributes to p21WAF1 degradation in oral cancer.Mrinmoyee MajumderViswanathan PalanisamyRNA-binding proteins (RBPs) associate with the primary, precursor, and mature microRNAs, which in turn control post-transcriptional gene regulation. Here, by small RNAseq, we show that RBP FXR1 controls the expression of a subset of mature miRNAs, including highly expressed miR301a-3p in oral cancer cells. We also confirm that FXR1 controls the stability of miR301a-3p. Exoribonuclease PNPT1 degrades miR301a-3p in the absence of FXR1 in oral cancer cells, and the degradation is rescued in the FXR1 and PNPT1 co-knockdown cells. In vitro, we show that PNPT1 is unable to bind and degrade the miRNA once the FXR1-miRNA complex forms. Both miR301a-3p and FXR1 cooperatively target the 3'-UTR of p21 mRNA to promote its degradation. Thus, our work illustrates the unique role of FXR1 that is critical for the stability of a subset of mature miRNAs or at least miR301a-3p to target p21 in oral cancer.https://doi.org/10.1371/journal.pgen.1008580
collection DOAJ
language English
format Article
sources DOAJ
author Mrinmoyee Majumder
Viswanathan Palanisamy
spellingShingle Mrinmoyee Majumder
Viswanathan Palanisamy
RNA binding protein FXR1-miR301a-3p axis contributes to p21WAF1 degradation in oral cancer.
PLoS Genetics
author_facet Mrinmoyee Majumder
Viswanathan Palanisamy
author_sort Mrinmoyee Majumder
title RNA binding protein FXR1-miR301a-3p axis contributes to p21WAF1 degradation in oral cancer.
title_short RNA binding protein FXR1-miR301a-3p axis contributes to p21WAF1 degradation in oral cancer.
title_full RNA binding protein FXR1-miR301a-3p axis contributes to p21WAF1 degradation in oral cancer.
title_fullStr RNA binding protein FXR1-miR301a-3p axis contributes to p21WAF1 degradation in oral cancer.
title_full_unstemmed RNA binding protein FXR1-miR301a-3p axis contributes to p21WAF1 degradation in oral cancer.
title_sort rna binding protein fxr1-mir301a-3p axis contributes to p21waf1 degradation in oral cancer.
publisher Public Library of Science (PLoS)
series PLoS Genetics
issn 1553-7390
1553-7404
publishDate 2020-01-01
description RNA-binding proteins (RBPs) associate with the primary, precursor, and mature microRNAs, which in turn control post-transcriptional gene regulation. Here, by small RNAseq, we show that RBP FXR1 controls the expression of a subset of mature miRNAs, including highly expressed miR301a-3p in oral cancer cells. We also confirm that FXR1 controls the stability of miR301a-3p. Exoribonuclease PNPT1 degrades miR301a-3p in the absence of FXR1 in oral cancer cells, and the degradation is rescued in the FXR1 and PNPT1 co-knockdown cells. In vitro, we show that PNPT1 is unable to bind and degrade the miRNA once the FXR1-miRNA complex forms. Both miR301a-3p and FXR1 cooperatively target the 3'-UTR of p21 mRNA to promote its degradation. Thus, our work illustrates the unique role of FXR1 that is critical for the stability of a subset of mature miRNAs or at least miR301a-3p to target p21 in oral cancer.
url https://doi.org/10.1371/journal.pgen.1008580
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