Fast phylogenetic inference from typing data

Fast phylogenetic inference from typing data

Abstract Background Microbial typing methods are commonly used to study the relatedness of bacterial strains. Sequence-based typing methods are a gold standard for epidemiological surveillance due to the inherent portability of sequence and allelic profile data, fast analysis times and their capacit...

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Bibliographic Details
Main Authors: João A. Carriço, Maxime Crochemore, Alexandre P. Francisco, Solon P. Pissis, Bruno Ribeiro-Gonçalves, Cátia Vaz
Format: Article
Language:English
Published: BMC 2018-02-01
Series:Algorithms for Molecular Biology
Subjects:
Computational biology
Phylogenetic inference
Hamming distance
Online Access:http://link.springer.com/article/10.1186/s13015-017-0119-7

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http://link.springer.com/article/10.1186/s13015-017-0119-7

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