An Improved Smith-Waterman Algorithm Based on Spark Parallelization
This paper proposes the design and the implementation of a Spark parallelization plan for improving the Smith-Waterman (SW) algorithm, named the Spark-OSW algorithm. Then, the Spark-OSW was verified through accuracy, performance and acceleration tests. The results show that the proposed algorithm ac...
| Main Authors: | , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Bulgarian Academy of Sciences
2019-03-01
|
| Series: | International Journal Bioautomation |
| Subjects: | |
| Online Access: | http://www.biomed.bas.bg/bioautomation/2019/vol_23.1/files/23.1_11.pdf |