The evolutionary analysis of emerging low frequency HIV-1 CXCR4 using variants through time--an ultra-deep approach.

Large-scale parallel pyrosequencing produces unprecedented quantities of sequence data. However, when generated from viral populations current mapping software is inadequate for dealing with the high levels of variation present, resulting in the potential for biased data loss. In order to apply the...

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Bibliographic Details
Main Authors: John Archer, Andrew Rambaut, Bruce E Taillon, P Richard Harrigan, Marilyn Lewis, David L Robertson
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2010-12-01
Series:PLoS Computational Biology
Online Access:http://europepmc.org/articles/PMC3002995?pdf=render