De novo assembly of the Brown trout (Salmo trutta m. fario) brain and muscle transcriptome: transcript annotation, tissue differential expression profile and SNP discovery

De novo assembly of the Brown trout (Salmo trutta m. fario) brain and muscle transcriptome: transcript annotation, tissue differential expression profile and SNP discovery

Abstract Objectives The Brown trout is a salmonid species with a high commercial value in Europe. Life history and spawning behaviour include resident (Salmo trutta m. fario) and migratory (Salmo trutta m. trutta) ecotypes. The main objective is to apply RNA-seq technology in order to obtain a refer...

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Bibliographic Details
Main Authors: J. Fibla, N. Oromi, M. Pascual-Pons, J. L. Royo, A. Palau, M. Fibla
Format: Article
Language:English
Published: BMC 2020-11-01
Series:BMC Research Notes
Subjects:
Rnaseq
De novo transcriptome
Brain & muscle transcriptome
SNP discovery
Salmo trutta m. fario
Online Access:http://link.springer.com/article/10.1186/s13104-020-05351-4

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http://link.springer.com/article/10.1186/s13104-020-05351-4

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