On the optimality of the neighbor-joining algorithm

<p>Abstract</p> <p>The popular neighbor-joining (NJ) algorithm used in phylogenetics is a greedy algorithm for finding the balanced minimum evolution (BME) tree associated to a dissimilarity map. From this point of view, NJ is "optimal" when the algorithm outputs the tree...

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Bibliographic Details
Main Authors: Pachter Lior, Huggins Peter, Eickmeyer Kord, Yoshida Ruriko
Format: Article
Language:English
Published: BMC 2008-04-01
Series:Algorithms for Molecular Biology
Online Access:http://www.almob.org/content/3/1/5