AGeNNT: annotation of enzyme families by means of refined neighborhood networks

AGeNNT: annotation of enzyme families by means of refined neighborhood networks

Abstract Background Large enzyme families may contain functionally diverse members that give rise to clusters in a sequence similarity network (SSN). In prokaryotes, the genome neighborhood of a gene-product is indicative of its function and thus, a genome neighborhood network (GNN) deduced for an S...

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Bibliographic Details
Main Authors: Florian Kandlinger, Maximilian G. Plach, Rainer Merkl
Format: Article
Language:English
Published: BMC 2017-05-01
Series:BMC Bioinformatics
Subjects:
Sequence similarity network
SSN
Genome neighborhood network
GNN
Genome content
Enzyme function
Online Access:http://link.springer.com/article/10.1186/s12859-017-1689-6

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http://link.springer.com/article/10.1186/s12859-017-1689-6

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