Random Shuffling Permutations of Nucleotides

In this paper, we discuss a shuffling sequence problem: Given a DNA sequence, we generate a random sequence that preserves the frequencies of all mononucleotides, dinucleotides, trinucleotides or some high order base-compositions of the given sequence. Two quadratic running time algorithms, called F...

Full description

Bibliographic Details
Main Authors: Shiquan Wu, Xun Gu
Format: Article
Language:English
Published: International Institute of Informatics and Cybernetics 2003-08-01
Series:Journal of Systemics, Cybernetics and Informatics
Subjects:
Online Access:http://www.iiisci.org/Journal/CV$/sci/pdfs/003132.pdf