SAHBNET, an Accessible Surface-Based Elastic Network: An Application to Membrane Protein

SAHBNET, an Accessible Surface-Based Elastic Network: An Application to Membrane Protein

Molecular Dynamics is a method of choice for membrane simulations and the rising of coarse-grained forcefields has opened the way to longer simulations with reduced calculations times. Here, we present an elastic network, SAHBNET (Surface Accessibility Hydrogen-Bonds elastic NETwork), that will main...

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Bibliographic Details
Main Authors: Laurence Lins, Robert Brasseur, Nicolas Dony, Jean Marc Crowet, Bernard Joris
Format: Article
Language:English
Published: MDPI AG 2013-05-01
Series:International Journal of Molecular Sciences
Subjects:
molecular dynamics
elastic network
coarse-grained
MARTINI forcefield
membrane
lipids
protein structure
hydrogen bond
accessible surface
Online Access:http://www.mdpi.com/1422-0067/14/6/11510

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http://www.mdpi.com/1422-0067/14/6/11510

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