Comparative analysis of A-to-I editing in human and non-human primate brains reveals conserved patterns and context-dependent regulation of RNA editing

Abstract A-to-I RNA editing is an important process for generating molecular diversity in the brain through modification of transcripts encoding several proteins important for neuronal signaling. We investigated the relationships between the extent of editing at multiple substrate transcripts (5HT2C...

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Main Authors: Richard T. O’Neil, Xiaojing Wang, Michael V. Morabito, Ronald B. Emeson
Format: Article
Language:English
Published: BMC 2017-04-01
Series:Molecular Brain
Subjects:
Online Access:http://link.springer.com/article/10.1186/s13041-017-0291-1
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spelling doaj-3c31988ffac5400fba1458f4ce9042772020-11-24T21:12:13ZengBMCMolecular Brain1756-66062017-04-011011910.1186/s13041-017-0291-1Comparative analysis of A-to-I editing in human and non-human primate brains reveals conserved patterns and context-dependent regulation of RNA editingRichard T. O’Neil0Xiaojing Wang1Michael V. Morabito2Ronald B. Emeson3Vanderbilt Brain Institute and Division of Nephrology, Vanderbilt University School of MedicineDepartment of Biomedical Informatics, Vanderbilt UniversityDepartment of Pharmacology, Vanderbilt UniversityDepartments of Pharmacology, Molecular Physiology and Biophysics, and the Vanderbilt Brain Institute, Vanderbilt UniversityAbstract A-to-I RNA editing is an important process for generating molecular diversity in the brain through modification of transcripts encoding several proteins important for neuronal signaling. We investigated the relationships between the extent of editing at multiple substrate transcripts (5HT2C, MGLUR4, CADPS, GLUR2, GLUR4, and GABRA3) in brain tissue obtained from adult humans and rhesus macaques. Several patterns emerged from these studies revealing conservation of editing across primate species. Additionally, variability in the human population allows us to make novel inferences about the co-regulation of editing at different editing sites and even across different brain regions.http://link.springer.com/article/10.1186/s13041-017-0291-15HT2C ReceptorEditing SiteAdenosine Deaminase ActingEditing EfficiencyDiscrete Brain Region
collection DOAJ
language English
format Article
sources DOAJ
author Richard T. O’Neil
Xiaojing Wang
Michael V. Morabito
Ronald B. Emeson
spellingShingle Richard T. O’Neil
Xiaojing Wang
Michael V. Morabito
Ronald B. Emeson
Comparative analysis of A-to-I editing in human and non-human primate brains reveals conserved patterns and context-dependent regulation of RNA editing
Molecular Brain
5HT2C Receptor
Editing Site
Adenosine Deaminase Acting
Editing Efficiency
Discrete Brain Region
author_facet Richard T. O’Neil
Xiaojing Wang
Michael V. Morabito
Ronald B. Emeson
author_sort Richard T. O’Neil
title Comparative analysis of A-to-I editing in human and non-human primate brains reveals conserved patterns and context-dependent regulation of RNA editing
title_short Comparative analysis of A-to-I editing in human and non-human primate brains reveals conserved patterns and context-dependent regulation of RNA editing
title_full Comparative analysis of A-to-I editing in human and non-human primate brains reveals conserved patterns and context-dependent regulation of RNA editing
title_fullStr Comparative analysis of A-to-I editing in human and non-human primate brains reveals conserved patterns and context-dependent regulation of RNA editing
title_full_unstemmed Comparative analysis of A-to-I editing in human and non-human primate brains reveals conserved patterns and context-dependent regulation of RNA editing
title_sort comparative analysis of a-to-i editing in human and non-human primate brains reveals conserved patterns and context-dependent regulation of rna editing
publisher BMC
series Molecular Brain
issn 1756-6606
publishDate 2017-04-01
description Abstract A-to-I RNA editing is an important process for generating molecular diversity in the brain through modification of transcripts encoding several proteins important for neuronal signaling. We investigated the relationships between the extent of editing at multiple substrate transcripts (5HT2C, MGLUR4, CADPS, GLUR2, GLUR4, and GABRA3) in brain tissue obtained from adult humans and rhesus macaques. Several patterns emerged from these studies revealing conservation of editing across primate species. Additionally, variability in the human population allows us to make novel inferences about the co-regulation of editing at different editing sites and even across different brain regions.
topic 5HT2C Receptor
Editing Site
Adenosine Deaminase Acting
Editing Efficiency
Discrete Brain Region
url http://link.springer.com/article/10.1186/s13041-017-0291-1
work_keys_str_mv AT richardtoneil comparativeanalysisofatoieditinginhumanandnonhumanprimatebrainsrevealsconservedpatternsandcontextdependentregulationofrnaediting
AT xiaojingwang comparativeanalysisofatoieditinginhumanandnonhumanprimatebrainsrevealsconservedpatternsandcontextdependentregulationofrnaediting
AT michaelvmorabito comparativeanalysisofatoieditinginhumanandnonhumanprimatebrainsrevealsconservedpatternsandcontextdependentregulationofrnaediting
AT ronaldbemeson comparativeanalysisofatoieditinginhumanandnonhumanprimatebrainsrevealsconservedpatternsandcontextdependentregulationofrnaediting
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