Segmentation of DNA into Coding and Noncoding Regions Based on Recursive Entropic Segmentation and Stop-Codon Statistics

Segmentation of DNA into Coding and Noncoding Regions Based on Recursive Entropic Segmentation and Stop-Codon Statistics

Heterogeneous DNA sequences can be partitioned into homogeneous domains that are comprised of the four nucleotides A, C, G, and T and the stop-codons. Recursively, we apply a new entropic segmentation method on DNA sequences using Jensen-Shannon and Jensen-Rényi divergences in order to find the b...

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Bibliographic Details
Main Authors: Daniel Nicorici, Jaakko Astola
Format: Article
Language:English
Published: SpringerOpen 2004-01-01
Series:EURASIP Journal on Advances in Signal Processing
Subjects:
recursive segmentation
DNA sequence
information divergence measures
statistics of stop-codons
Bayesian information criterion.
Online Access:http://dx.doi.org/10.1155/S1110865704309212

Internet

http://dx.doi.org/10.1155/S1110865704309212

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