Uncovering pseudotemporal trajectories with covariates from single cell and bulk expression data

Cross-sectional omic data often have non-homogeneous genetic, phenotypic, or environmental backgrounds. Here, the authors develop a statistical framework to infer pseudotime trajectories in the presence of such factors as well as their interactions in both single-cell and bulk gene expression analys...

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Bibliographic Details
Main Authors: Kieran R Campbell, Christopher Yau
Format: Article
Language:English
Published: Nature Publishing Group 2018-06-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-018-04696-6