Cloud accelerated alignment and assembly of full-length single-cell RNA-seq data using Falco

Cloud accelerated alignment and assembly of full-length single-cell RNA-seq data using Falco

Abstract Background Read alignment and transcript assembly are the core of RNA-seq analysis for transcript isoform discovery. Nonetheless, current tools are not designed to be scalable for analysis of full-length bulk or single cell RNA-seq (scRNA-seq) data. The previous version of our cloud-based t...

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Bibliographic Details
Main Authors: Andrian Yang, Abhinav Kishore, Benjamin Phipps, Joshua W. K. Ho
Format: Article
Language:English
Published: BMC 2019-12-01
Series:BMC Genomics
Subjects:
Single-cell RNA-seq
Cloud computing
Falco
Alignment
Transcript assembly
Online Access:https://doi.org/10.1186/s12864-019-6341-6

Internet

https://doi.org/10.1186/s12864-019-6341-6

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