PhyloPi: An affordable, purpose built phylogenetic pipeline for the HIV drug resistance testing facility.

INTRODUCTION:Phylogenetic analysis plays a crucial role in quality control in the HIV drug resistance testing laboratory. If previous patient sequence data is available sample swaps can be detected and investigated. As Antiretroviral treatment coverage is increasing in many developing countries, so...

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Bibliographic Details
Main Authors: Phillip Armand Bester, Andrie De Vries, Stephanus Riekert, Kim Steegen, Gert van Zyl, Dominique Goedhals
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2019-01-01
Series:PLoS ONE
Online Access:https://doi.org/10.1371/journal.pone.0213241