HaVec: An Efficient de Bruijn Graph Construction Algorithm for Genome Assembly

Background. The rapid advancement of sequencing technologies has made it possible to regularly produce millions of high-quality reads from the DNA samples in the sequencing laboratories. To this end, the de Bruijn graph is a popular data structure in the genome assembly literature for efficient repr...

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Bibliographic Details
Main Authors: Md Mahfuzer Rahman, Ratul Sharker, Sajib Biswas, M. Sohel Rahman
Format: Article
Language:English
Published: Hindawi Limited 2017-01-01
Series:International Journal of Genomics
Online Access:http://dx.doi.org/10.1155/2017/6120980