Metabarcoding free‐living marine nematodes using curated 18S and CO1 reference sequence databases for species‐level taxonomic assignments

Metabarcoding free‐living marine nematodes using curated 18S and CO1 reference sequence databases for species‐level taxonomic assignments

Abstract High‐throughput sequencing has the potential to describe biological communities with high efficiency yet comprehensive assessment of diversity with species‐level resolution remains one of the most challenging aspects of metabarcoding studies. We investigated the utility of curated ribosomal...

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Bibliographic Details
Main Authors: Lara Macheriotou, Katja Guilini, Tania Nara Bezerra, Bjorn Tytgat, Dinh Tu Nguyen, Thi Xuan Phuong Nguyen, Febe Noppe, Maickel Armenteros, Fehmi Boufahja, Annelien Rigaux, Ann Vanreusel, Sofie Derycke
Format: Article
Language:English
Published: Wiley 2019-02-01
Series:Ecology and Evolution
Subjects:
metabarcoding
mock community
Nematoda
reference sequence database
UClust
USearch9
Online Access:https://doi.org/10.1002/ece3.4814

Internet

https://doi.org/10.1002/ece3.4814

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